Résumé

Researcher

PT. PathGen Diagnostik Teknologi

• Develop analysis software for high resolution melting (HRM) experiment. Openmelt served as accompanying software for PCR-HRM molecular diagnostics kit.
  https://github.com/enzimatik/openmelt

• Develop analysis pipeline for large-set molecular data (HRM & NGS) and clinicopathology data from colorectal cancer patient.
  https://github.com/enzimatik/gtsumeasy

• Develop and manage machine learning solutions for enabling faster diagnosis and biomarker analysis.
  https://deepglioma.herokuapp.com/

COVID-19 Testing Team

BSL3 Facility, Indonesian Institute of Science

• Responsible in routine clinical samples testing for COVID-19 and whole genome sequencing. WGS analysis done using Oxford Nanopore's MinION sequencing platform and ARTIC pipeline.
  EPI_ISL_833506

• Analyse publicly available COVID-19 sequence data using python and R libraries to generate insight for exposure pattern among Asian countries.
  https://doi.org/10.3390/v14040778

Researcher Assistant, Bioinformatics

PT. Aretha Medika Utama

• Develop bioinformatic analysis pipeline for analysing potential natural compound against aging and cancer related markers.
  http://dx.doi.org/10.2306/scienceasia1513-1874.2019.45.452

Susanti, S., Wibowo, S., Akbariani, G., Yoshuantari, N., Heriyanto, D. S., Ridwanuloh, A. M., Hariyatun, H., Handaya, A. Y., Kurnianda, J., Hutajulu, S. H., & Ilyas, M. (2021). Molecular Analysis of Colorectal Cancers Suggests a High Frequency of Lynch Syndrome in Indonesia. Cancers, 13(24), 6245. https://doi.org/10.3390/cancers13246245

Cahyani, I., Putro, E. W., Ridwanuloh, A. M., Wibowo, S., Hariyatun, H., Syahputra, G., Akbariani, G., Utomo, A. R., Ilyas, M., Loose, M., Kusharyoto, W., & Susanti, S. (2022). Genome Profiling of SARS-CoV-2 in Indonesia, ASEAN and the Neighbouring East Asian Countries: Features, Challenges and Achievements. Viruses, 14(4), 778. https://doi.org/10.3390/v14040778

Bachelor of Science (B.Sc.) in Biology

Universitas Pendidikan Indonesia